Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_0809Hypothetical protein. (268 aa)    
Predicted Functional Partners:
vipF
Hypothetical protein; N-terminal GNAT family acetyltransferase.
       0.748
Lstg_0810
Hypothetical protein.
       0.722
Lstg_2033
Rho GTPase (Miro-like).
  
     0.603
drrA_2
Multifunctional virulence effector protein DrrA.
  
     0.527
yicO
Xanthine/uracil permease.
       0.507
Lstg_1784
Ectonucleoside triphosphate diphosphohydrolase.
  
     0.504
Lstg_0972
Ankyrin repeat protein.
  
     0.497
Lstg_2681
Ras family GTPase.
  
     0.473
aph_1
Spectinomycin phosphotransferase.
  
     0.462
fabF-2
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.460
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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