Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
Lstg_0835Ras family GTPase. (311 aa)    
Predicted Functional Partners:
Lstg_2033
Rho GTPase (Miro-like).
  
     0.774
drrA_2
Multifunctional virulence effector protein DrrA.
  
     0.758
Lstg_0599
Putative solute carrier protein.
  
     0.756
Lstg_1207
Protein phosphatase 2C.
  
 
   0.747
Lstg_1784
Ectonucleoside triphosphate diphosphohydrolase.
  
     0.681
Lstg_0834
Ankyrin repeats (3 copies).
 
 
  0.673
pknF
Serine/threonine protein kinase.
  
     0.641
Lstg_2838
Ankyrin repeat protein.
  
 
  0.634
Lstg_1463
cNMP-binding protein.
  
 
  0.620
Lstg_2435
Ankyrin repeat protein.
  
 
  0.620
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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