Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Hgd | Lstg_1863 | Lstg_0850 | Lstg_1863 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | acyl-CoA synthetase. | 0.612 |
| Hgd | acsB | Lstg_0850 | Lstg_0849 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.929 |
| Hgd | fadB | Lstg_0850 | Lstg_0236 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.843 |
| Hgd | gltA | Lstg_0850 | Lstg_1960 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Citrate synthase; Belongs to the citrate synthase family. | 0.482 |
| Hgd | mmsA | Lstg_0850 | Lstg_0851 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH), oxidoreductase. | 0.893 |
| Hgd | prpC | Lstg_0850 | Lstg_0637 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.637 |
| Hgd | yfcX | Lstg_0850 | Lstg_0351 | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.843 |
| Lstg_1206 | Lstg_1386 | Lstg_1206 | Lstg_1386 | Saframycin Mx1 synthetase B. | acyl-CoA synthetase. | 0.999 |
| Lstg_1206 | Lstg_1863 | Lstg_1206 | Lstg_1863 | Saframycin Mx1 synthetase B. | acyl-CoA synthetase. | 0.999 |
| Lstg_1206 | acsB | Lstg_1206 | Lstg_0849 | Saframycin Mx1 synthetase B. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.889 |
| Lstg_1206 | fadB | Lstg_1206 | Lstg_0236 | Saframycin Mx1 synthetase B. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.954 |
| Lstg_1206 | gltA | Lstg_1206 | Lstg_1960 | Saframycin Mx1 synthetase B. | Citrate synthase; Belongs to the citrate synthase family. | 0.794 |
| Lstg_1206 | mmsA | Lstg_1206 | Lstg_0851 | Saframycin Mx1 synthetase B. | Methylmalonate-semialdehyde dehydrogenase [acylating] (MMSDH), oxidoreductase. | 0.685 |
| Lstg_1206 | prpC | Lstg_1206 | Lstg_0637 | Saframycin Mx1 synthetase B. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.794 |
| Lstg_1206 | pta | Lstg_1206 | Lstg_0614 | Saframycin Mx1 synthetase B. | Phosphate acetyl/butaryl transferase. | 0.862 |
| Lstg_1206 | yfcX | Lstg_1206 | Lstg_0351 | Saframycin Mx1 synthetase B. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.954 |
| Lstg_1386 | Lstg_1206 | Lstg_1386 | Lstg_1206 | acyl-CoA synthetase. | Saframycin Mx1 synthetase B. | 0.999 |
| Lstg_1386 | Lstg_1863 | Lstg_1386 | Lstg_1863 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.999 |
| Lstg_1386 | acsB | Lstg_1386 | Lstg_0849 | acyl-CoA synthetase. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.865 |
| Lstg_1386 | fadB | Lstg_1386 | Lstg_0236 | acyl-CoA synthetase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.955 |
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