STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_0872Acetyltransferase. (180 aa)    
Predicted Functional Partners:
yddE
Epimerase.
       0.794
pdhB_2
Pyruvate/2-oxoglutarate dehydrogenase subunit E1.
    
  0.689
pta
Phosphate acetyl/butaryl transferase.
    
 0.679
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.662
iucD
L-lysine N6-monooxygenase.
  
 
 0.538
fabD_1
Malonyl CoA-ACP transacylase.
       0.503
Lstg_1863
acyl-CoA synthetase.
  
 
 0.459
Lstg_3199
Aminoglycoside 3-N-acetyltransferase.
   
  0.416
Lstg_0757
Phosphotransferase enzyme family protein.
    
  0.414
Lstg_3189
Phosphotransferase enzyme family protein.
    
  0.414
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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