rnc protein (Legionella steigerwaltii) - STRING interaction network

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rnc

Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (226 aa)

Predicted Functional Partners:

prfB

0.928

lepB_1

0.914

Lstg_1863

0.909

rplT

0.893

Lstg_1984

0.890

rplC

0.887

rplQ

0.886

rplS

0.885

rpmA

0.884

Lstg_0900

0.883

Your Current Organism:

Legionella steigerwaltii

NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lstg_0900	lepB_1	Lstg_0900	Lstg_0901	Transmembrane protein.	Signal peptidase I; Belongs to the peptidase S26 family.	0.757
Lstg_0900	rnc	Lstg_0900	Lstg_0899	Transmembrane protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.883
Lstg_1863	prfB	Lstg_1863	Lstg_0154	acyl-CoA synthetase.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.538
Lstg_1863	rnc	Lstg_1863	Lstg_0899	acyl-CoA synthetase.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.909
Lstg_1863	rplC	Lstg_1863	Lstg_2583	acyl-CoA synthetase.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.916
Lstg_1863	rplQ	Lstg_1863	Lstg_2608	acyl-CoA synthetase.	50S ribosomal protein L17.	0.919
Lstg_1863	rplS	Lstg_1863	Lstg_1554	acyl-CoA synthetase.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.899
Lstg_1863	rplT	Lstg_1863	Lstg_1078	acyl-CoA synthetase.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.910
Lstg_1863	rpmA	Lstg_1863	Lstg_2360	acyl-CoA synthetase.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.547
Lstg_1984	rnc	Lstg_1984	Lstg_0899	TrpH protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.890
lepB_1	Lstg_0900	Lstg_0901	Lstg_0900	Signal peptidase I; Belongs to the peptidase S26 family.	Transmembrane protein.	0.757
lepB_1	rnc	Lstg_0901	Lstg_0899	Signal peptidase I; Belongs to the peptidase S26 family.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.914
prfB	Lstg_1863	Lstg_0154	Lstg_1863	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	acyl-CoA synthetase.	0.538
prfB	rnc	Lstg_0154	Lstg_0899	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.928
prfB	rplC	Lstg_0154	Lstg_2583	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.915
prfB	rplQ	Lstg_0154	Lstg_2608	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L17.	0.937
prfB	rplS	Lstg_0154	Lstg_1554	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.927
prfB	rplT	Lstg_0154	Lstg_1078	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.949
prfB	rpmA	Lstg_0154	Lstg_2360	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.936
rnc	Lstg_0900	Lstg_0899	Lstg_0900	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Transmembrane protein.	0.883

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