STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_0900Transmembrane protein. (130 aa)    
Predicted Functional Partners:
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.852
Lstg_1365
Type 4 fimbrial biogenesis protein PilY1.
 
   
 0.734
Lstg_1362
Pre-pilin leader sequence (pilV).
  
   
 0.726
fimT
Type IV pre-pilin.
  
   
 0.718
Lstg_1363
Tfp pilus assembly protein PilW.
 
   
 0.693
Lstg_3035
Hypothetical protein.
  
     0.663
pilE_1
Type-IV pilin.
 
  
 0.662
atpC_2
F-type H -transporting ATPase epsilon chain.
  
  
  0.656
lepB_1
Signal peptidase I; Belongs to the peptidase S26 family.
  
    0.629
Lstg_3202
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.617
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.