STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_0910BNR/Asp-box repeat containing protein. (520 aa)    
Predicted Functional Partners:
Lstg_2785
Type III restriction enzyme, res subunit.
  
 
   0.735
Lstg_0909
Hypothetical protein.
       0.727
Lstg_2490
Putative helicase/relaxase.
 
    0.724
dgt
dGTP triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
    
  0.706
Lstg_1402
Sphingomyelin phosphodiesterase.
  
  
  0.675
Lstg_0911
Coiled-coil protein.
  
     0.672
Lstg_1861
Hypothetical protein.
  
     0.638
Lstg_1293
Putative secreted esterase.
  
    0.631
Lstg_0511
Serine/threonine-protein kinase.
  
    0.630
norB
Nitric oxide reductase.
   
 0.621
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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