Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
degP_2DegP protease (Do-like, S2-serine-like). (358 aa)    
Predicted Functional Partners:
Lstg_1018
Hypothetical protein.
       0.586
Lstg_1019
Hypothetical protein.
       0.570
Lstg_0064
Ankyrin repeats (3 copies).
  
 
  0.506
fabG_4-2
3-hydroxyacyl-CoA dehydrogenase.
   
  0.504
ycaC
YcaC related amidohydrolase.
  
    0.501
Lstg_1863
acyl-CoA synthetase.
  
 0.493
Lstg_1482
Ankyrin repeat protein.
  
 
  0.476
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
  0.474
Lstg_2265
Ankyrin repeats (3 copies).
  
 
  0.466
Lstg_0834
Ankyrin repeats (3 copies).
  
 
  0.464
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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