Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lstg_1047 | hcl_2 | Lstg_1047 | Lstg_1051 | OPT family oligopeptide transporter. | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | 0.432 |
Lstg_1047 | hutI | Lstg_1047 | Lstg_1049 | OPT family oligopeptide transporter. | Imidazolone-5-propionate hydrolase. | 0.802 |
Lstg_1047 | yjeA_1 | Lstg_1047 | Lstg_1048 | OPT family oligopeptide transporter. | Endo-1,4-beta-xylanase. | 0.802 |
Lstg_1047 | yueD_2 | Lstg_1047 | Lstg_1050 | OPT family oligopeptide transporter. | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.802 |
hcl_2 | Lstg_1047 | Lstg_1051 | Lstg_1047 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | OPT family oligopeptide transporter. | 0.432 |
hcl_2 | hutI | Lstg_1051 | Lstg_1049 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Imidazolone-5-propionate hydrolase. | 0.432 |
hcl_2 | yjeA_1 | Lstg_1051 | Lstg_1048 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Endo-1,4-beta-xylanase. | 0.499 |
hcl_2 | yueD_2 | Lstg_1051 | Lstg_1050 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.563 |
hutI | Lstg_1047 | Lstg_1049 | Lstg_1047 | Imidazolone-5-propionate hydrolase. | OPT family oligopeptide transporter. | 0.802 |
hutI | hcl_2 | Lstg_1049 | Lstg_1051 | Imidazolone-5-propionate hydrolase. | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | 0.432 |
hutI | yjeA_1 | Lstg_1049 | Lstg_1048 | Imidazolone-5-propionate hydrolase. | Endo-1,4-beta-xylanase. | 0.802 |
hutI | yueD_2 | Lstg_1049 | Lstg_1050 | Imidazolone-5-propionate hydrolase. | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.802 |
yjeA_1 | Lstg_1047 | Lstg_1048 | Lstg_1047 | Endo-1,4-beta-xylanase. | OPT family oligopeptide transporter. | 0.802 |
yjeA_1 | hcl_2 | Lstg_1048 | Lstg_1051 | Endo-1,4-beta-xylanase. | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | 0.499 |
yjeA_1 | hutI | Lstg_1048 | Lstg_1049 | Endo-1,4-beta-xylanase. | Imidazolone-5-propionate hydrolase. | 0.802 |
yjeA_1 | yueD_2 | Lstg_1048 | Lstg_1050 | Endo-1,4-beta-xylanase. | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.821 |
yueD_2 | Lstg_1047 | Lstg_1050 | Lstg_1047 | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | OPT family oligopeptide transporter. | 0.802 |
yueD_2 | hcl_2 | Lstg_1050 | Lstg_1051 | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | 0.563 |
yueD_2 | hutI | Lstg_1050 | Lstg_1049 | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Imidazolone-5-propionate hydrolase. | 0.802 |
yueD_2 | yjeA_1 | Lstg_1050 | Lstg_1048 | Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Endo-1,4-beta-xylanase. | 0.821 |