Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_0269 | Lstg_1182 | Lstg_0269 | Lstg_1182 | Putative iron-sulpher cluster proteins NifU. | Metal-sulfur cluster biosynthetic enzyme. | 0.705 |
| Lstg_0269 | moeZ_3 | Lstg_0269 | Lstg_0938 | Putative iron-sulpher cluster proteins NifU. | Thiazole biosynthesis adenylyltransferase ThiF. | 0.591 |
| Lstg_0269 | nsrR_2 | Lstg_0269 | Lstg_1176 | Putative iron-sulpher cluster proteins NifU. | Rrf2 family transporter protein. | 0.654 |
| Lstg_0269 | sufB | Lstg_0269 | Lstg_1177 | Putative iron-sulpher cluster proteins NifU. | Cysteine desulfurase. | 0.771 |
| Lstg_0269 | sufC | Lstg_0269 | Lstg_1178 | Putative iron-sulpher cluster proteins NifU. | Component of SufBCD complex, ATP-binding component of ABC superfamily. | 0.871 |
| Lstg_0269 | sufD | Lstg_0269 | Lstg_1179 | Putative iron-sulpher cluster proteins NifU. | Component of SufBCD complex. | 0.771 |
| Lstg_0269 | sufS_1 | Lstg_0269 | Lstg_1180 | Putative iron-sulpher cluster proteins NifU. | Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.970 |
| Lstg_1182 | Lstg_0269 | Lstg_1182 | Lstg_0269 | Metal-sulfur cluster biosynthetic enzyme. | Putative iron-sulpher cluster proteins NifU. | 0.705 |
| Lstg_1182 | nifU | Lstg_1182 | Lstg_1181 | Metal-sulfur cluster biosynthetic enzyme. | NifU family FeS assembly SUF system protein. | 0.881 |
| Lstg_1182 | nsrR_2 | Lstg_1182 | Lstg_1176 | Metal-sulfur cluster biosynthetic enzyme. | Rrf2 family transporter protein. | 0.569 |
| Lstg_1182 | sufB | Lstg_1182 | Lstg_1177 | Metal-sulfur cluster biosynthetic enzyme. | Cysteine desulfurase. | 0.859 |
| Lstg_1182 | sufC | Lstg_1182 | Lstg_1178 | Metal-sulfur cluster biosynthetic enzyme. | Component of SufBCD complex, ATP-binding component of ABC superfamily. | 0.888 |
| Lstg_1182 | sufD | Lstg_1182 | Lstg_1179 | Metal-sulfur cluster biosynthetic enzyme. | Component of SufBCD complex. | 0.871 |
| Lstg_1182 | sufS_1 | Lstg_1182 | Lstg_1180 | Metal-sulfur cluster biosynthetic enzyme. | Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.818 |
| Lstg_1672 | sufS_1 | Lstg_1672 | Lstg_1180 | Endonuclease/exonuclease/phosphatase family protein. | Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.856 |
| Lstg_2013 | sufS_1 | Lstg_2013 | Lstg_1180 | Endonuclease/Exonuclease/phosphatase family protein. | Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.856 |
| moeZ_3 | Lstg_0269 | Lstg_0938 | Lstg_0269 | Thiazole biosynthesis adenylyltransferase ThiF. | Putative iron-sulpher cluster proteins NifU. | 0.591 |
| moeZ_3 | nifU | Lstg_0938 | Lstg_1181 | Thiazole biosynthesis adenylyltransferase ThiF. | NifU family FeS assembly SUF system protein. | 0.591 |
| moeZ_3 | nsrR_2 | Lstg_0938 | Lstg_1176 | Thiazole biosynthesis adenylyltransferase ThiF. | Rrf2 family transporter protein. | 0.477 |
| moeZ_3 | sufS_1 | Lstg_0938 | Lstg_1180 | Thiazole biosynthesis adenylyltransferase ThiF. | Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.823 |
page 1 of 4