STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpfGSensory protein (PAS domain). (854 aa)    
Predicted Functional Partners:
cph2_5
Regulatory protein (GGDEF domain).
 0.952
gmr_1
Regulatory protein (GGDEF domain).
 0.944
pleD_1
Sensor histidine kinase.
 
 0.940
cph2_2
Regulatory protein (GGDEF, PAS, PAC domains).
 
 0.927
gmr_2
Inner membrane protein/sensory box protein LssE.
 
  
 0.876
cyaA
Fused adenylate cyclase/two component hybrid sensor/regulator.
  
 0.804
luxQ_2
Sensor histidine kinase.
    
 0.785
cyaA_1
Adenylate/guanylate cyclase transmembrane protein.
 
  
  0.767
adrA
Two component response regulator with GGDEF domain protein.
 
  
 0.758
gmr_3
Regulatory protein (GGDEF and EAL domains).
   
 0.751
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.