STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_1228Calcium-transporting ATPase. (1139 aa)    
Predicted Functional Partners:
Lstg_1812
Sulfite reductase.
  
 
 0.909
Lstg_3319
Hypothetical protein.
  
  
  0.822
Lstg_1463
cNMP-binding protein.
  
  
  0.799
Lstg_0241
Cyclic nucleotide-binding domain protein.
  
  
  0.796
Lstg_1685
Ankyrin repeat protein.
  
   0.795
Lstg_0785
SET domain protein.
  
 
 
 0.792
bcp
Acetylpolyamine aminohydrolase.
  
 
   0.790
Lstg_1381
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
  
 
 0.789
Lstg_0160
Photosystem I assembly protein Ycf3.
  
   0.788
Lstg_1207
Protein phosphatase 2C.
  
 
   0.786
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.