STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_1256Hypothetical protein. (469 aa)    
Predicted Functional Partners:
Lstg_0601
NHL repeat protein.
   
  0.616
Lstg_1887
Protein with a bacterial immunoglobulin-like domain protein.
   
  0.616
Lstg_3331
NHL repeat protein.
   
  0.616
pta
Phosphate acetyl/butaryl transferase.
    
  0.556
gshA
Glutamate--cysteine ligase.
    
  0.533
amiB
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.493
amyA
Alpha-amylase.
     
 0.491
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.469
Lstg_1257
Hypothetical protein.
       0.458
envC
Peptidase, M23 family.
  
    0.416
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.