STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_1285Major facilitator superfamily (MFS) transporter. (414 aa)    
Predicted Functional Partners:
bacD
Phosphoribosylglycinamide synthetase ATP-grasp (A) domain protein.
 
     0.835
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
    0.811
ygeA
Putative racemase; Belongs to the aspartate/glutamate racemases family.
       0.774
thrB
Homoserine kinase.
  
     0.597
panD_1
Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.539
Lstg_3164
Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.526
Lstg_1863
acyl-CoA synthetase.
    
 0.510
aacA-aphD_2
Aminoglycoside 6'-N-acetyltransferase.
 
     0.509
celA
Endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.487
Lstg_3170
Putative secreted esterase.
  
     0.466
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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