STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_1362Pre-pilin leader sequence (pilV). (181 aa)    
Predicted Functional Partners:
Lstg_1363
Tfp pilus assembly protein PilW.
 
  
 0.989
pilX
Tfp pilus assembly protein PilX.
 
  
 0.988
Lstg_1365
Type 4 fimbrial biogenesis protein PilY1.
 
  
 0.987
pilE_1
Type-IV pilin.
 
  
 0.979
fimT
Type IV pre-pilin.
 
  
 0.971
Lstg_1367
DNA internalization-related competence protein ComEC/Rec2.
 
   
 0.828
pilN
Tfp pilus assembly protein PilN.
 
   
 0.791
pilO
Tfp pilus assembly protein PilO.
 
   
 0.778
pilP
Tfp pilus assembly protein PilP.
  
  
 0.775
Lstg_1851
Hypothetical protein.
  
  
 0.749
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.