STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacB_1D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. (597 aa)    
Predicted Functional Partners:
Lstg_2557
LD-carboxypeptidase.
 
  
  0.813
Lstg_2513
Enhanced entry protein EnhA.
  
  
  0.759
Lstg_1009
Hypothetical protein.
  
  
  0.746
Lstg_3210
Muramoyltetrapeptide carboxypeptidase.
 
  
  0.743
enhA_3
Enhanced entry protein EnhA.
  
  
  0.742
ldcA
Muramoyltetrapeptide carboxypeptidase.
 
  
  0.738
Lstg_0218
Enhanced entry protein EnhA.
  
  
  0.736
Lstg_2287
Hypothetical protein.
 
  
  0.736
dacB_2
D-Ala-D-Ala carboxypeptidase.
  
  
 
0.703
rodA
Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
     
 0.697
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.