Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lstg_0609 | Lstg_1470 | Lstg_0609 | Lstg_1470 | Transmembrane protein. | Aminopeptidase. | 0.481 |
Lstg_0609 | aprX | Lstg_0609 | Lstg_2236 | Transmembrane protein. | Subtilisin-like serine protease. | 0.619 |
Lstg_1397 | Lstg_1470 | Lstg_1397 | Lstg_1470 | Putative biotin synthetase like protein. | Aminopeptidase. | 0.530 |
Lstg_1397 | letS | Lstg_1397 | Lstg_1796 | Putative biotin synthetase like protein. | Legionella transmission sensor LetS. | 0.738 |
Lstg_1470 | Lstg_0609 | Lstg_1470 | Lstg_0609 | Aminopeptidase. | Transmembrane protein. | 0.481 |
Lstg_1470 | Lstg_1397 | Lstg_1470 | Lstg_1397 | Aminopeptidase. | Putative biotin synthetase like protein. | 0.530 |
Lstg_1470 | Lstg_1471 | Lstg_1470 | Lstg_1471 | Aminopeptidase. | Hypothetical protein. | 0.578 |
Lstg_1470 | Lstg_1584 | Lstg_1470 | Lstg_1584 | Aminopeptidase. | Glucan 1,4-alpha-glucosidase. | 0.706 |
Lstg_1470 | aprX | Lstg_1470 | Lstg_2236 | Aminopeptidase. | Subtilisin-like serine protease. | 0.517 |
Lstg_1470 | bprV | Lstg_1470 | Lstg_1750 | Aminopeptidase. | Serine protease; Belongs to the peptidase S8 family. | 0.607 |
Lstg_1470 | cls | Lstg_1470 | Lstg_1232 | Aminopeptidase. | Cardiolipin synthase. | 0.768 |
Lstg_1470 | hap | Lstg_1470 | Lstg_3418 | Aminopeptidase. | Zinc metalloproteinase precursor; Extracellular zinc metalloprotease. | 0.489 |
Lstg_1470 | letS | Lstg_1470 | Lstg_1796 | Aminopeptidase. | Legionella transmission sensor LetS. | 0.475 |
Lstg_1470 | proA | Lstg_1470 | Lstg_1670 | Aminopeptidase. | Zinc metalloproteinase precursor; Extracellular zinc metalloprotease. | 0.476 |
Lstg_1471 | Lstg_1470 | Lstg_1471 | Lstg_1470 | Hypothetical protein. | Aminopeptidase. | 0.578 |
Lstg_1584 | Lstg_1470 | Lstg_1584 | Lstg_1470 | Glucan 1,4-alpha-glucosidase. | Aminopeptidase. | 0.706 |
aprX | Lstg_0609 | Lstg_2236 | Lstg_0609 | Subtilisin-like serine protease. | Transmembrane protein. | 0.619 |
aprX | Lstg_1470 | Lstg_2236 | Lstg_1470 | Subtilisin-like serine protease. | Aminopeptidase. | 0.517 |
bprV | Lstg_1470 | Lstg_1750 | Lstg_1470 | Serine protease; Belongs to the peptidase S8 family. | Aminopeptidase. | 0.607 |
cls | Lstg_1470 | Lstg_1232 | Lstg_1470 | Cardiolipin synthase. | Aminopeptidase. | 0.768 |
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