STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhR_1ABC transporter permease. (378 aa)    
Predicted Functional Partners:
ybhF_2
ABC transporter ATP-binding protein.
 
  0.993
ybhF_1
ABC transporter ATP-binding protein.
 
  0.986
ccmA_2
ABC transporter ATP binding protein.
 
 
  0.940
yadG
Transporter subunit: ATP-binding component of ABC superfamily protein.
 
 
  0.884
mdtE_2
Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.852
macA_1
Hemolysin D.
 
  
 0.783
lptB
Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein.
   
  0.771
ybhR_2
ABC transporter permease.
 
  
 
0.669
Lstg_1551
Cyclic nucleotide-binding protein.
       0.645
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
 0.574
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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