STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_1649Type II/III secretion system protein. (247 aa)    
Predicted Functional Partners:
Lstg_1022
General secretion pathway protein C.
 
 
 0.965
pilZ_1
Type IV pilus assembly PilZ.
  
     0.765
iraA
Small-molecule methyltransferase IraA.
  
     0.750
Lstg_0911
Coiled-coil protein.
  
     0.748
Lstg_2785
Type III restriction enzyme, res subunit.
  
     0.748
ankK
Cardiac ankyrin repeat -containing protein K.
  
     0.735
Lstg_1774
Ankyrin repeats (3 copies).
  
     0.733
Lstg_2845
GNAT family acetyltransferase.
  
     0.732
Lstg_0979
DamX-related protein.
 
     0.728
Lstg_2810
Hypothetical protein.
  
     0.726
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.