STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_1687Alanine racemase. (374 aa)    
Predicted Functional Partners:
rhtC
LysE type translocator.
       0.724
Lstg_2436
Glyoxalase/bleomycin resistance protein.
   
 
  0.660
budB
Acetolactate synthase; Belongs to the TPP enzyme family.
 
 
  0.656
gloA
Lactoylglutathione lyase.
   
 
  0.638
Lstg_2070
NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.
     
 0.637
Lstg_2369
Putative lyase.
   
 
  0.629
Lstg_1065
Hypothetical protein.
  
  
  0.550
Lstg_1212
Glyoxalase-like domain protein.
  
  
  0.544
Lstg_0101
Putative Acetyltransferase, GNAT family.
 
 
  0.543
thiO_1
FAD dependent oxidoreductase.
  
  
  0.523
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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