STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrA_2-2Hemolysin D. (331 aa)    
Predicted Functional Partners:
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB.
 
 
 0.967
emrB_1
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
 0.819
emrB_3-2
Multidrug resistance protein, MFS superfamily.
  
  0.818
emrB_3
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
 0.815
mdtP
Outer membrane efflux lipoprotein.
 
  0.695
hsrA
Multidrug efflux protein; Belongs to the major facilitator superfamily.
  
 0.676
ttgC_2
Outer membrane efflux protein.
 
  0.667
ttgC_1
Outer membrane efflux protein.
 
  0.662
ttgC_3
Outer membrane efflux protein.
 
  0.655
oprM_2
Outer membrane efflux protein.
 
  0.647
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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