STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaaAHypothetical protein; Belongs to the UPF0246 family. (258 aa)    
Predicted Functional Partners:
hoxN
High affinity nickel transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
      0.655
Lstg_1910
Hypothetical protein.
       0.615
glnA
Glutamine synthetase.
       0.600
acdS
1-aminocyclopropane-1-carboxylate deaminase.
       0.571
lspF
Type II secretory pathway protein LspF.
       0.470
htpG
Class III heat-shock protein HtpG(molecular chaperone); Molecular chaperone. Has ATPase activity.
       0.447
lspK
Type II secretory pathway protein LspK.
       0.434
lspH
Type II secretory pathway protein LspH.
       0.434
lspJ
Type II secretory pathway protein LspJ.
       0.419
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.