Lstg_1933 protein (Legionella steigerwaltii)

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second shell of interactors

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Score

Lstg_1933

Metal-binding protein. (142 aa)

Predicted Functional Partners:

rpmF

0.978

rpsC

0.915

rpsP

0.895

rplK

0.895

rpsF

0.891

rplM

0.889

rplU

0.887

rpsB

0.884

infC

0.882

rplD

0.881

Your Current Organism:

Legionella steigerwaltii

NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lstg_1933	infC	Lstg_1933	Lstg_1076	Metal-binding protein.	Translation initiation factor IF-3; Belongs to the IF-3 family.	0.882
Lstg_1933	rplD	Lstg_1933	Lstg_2584	Metal-binding protein.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.881
Lstg_1933	rplK	Lstg_1933	Lstg_2572	Metal-binding protein.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.895
Lstg_1933	rplM	Lstg_1933	Lstg_1083	Metal-binding protein.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.889
Lstg_1933	rplU	Lstg_1933	Lstg_2361	Metal-binding protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.887
Lstg_1933	rpmF	Lstg_1933	Lstg_1934	Metal-binding protein.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.978
Lstg_1933	rpsB	Lstg_1933	Lstg_2029	Metal-binding protein.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.884
Lstg_1933	rpsC	Lstg_1933	Lstg_2589	Metal-binding protein.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.915
Lstg_1933	rpsF	Lstg_1933	Lstg_0355	Metal-binding protein.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.891
Lstg_1933	rpsP	Lstg_1933	Lstg_1557	Metal-binding protein.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.895
infC	Lstg_1933	Lstg_1076	Lstg_1933	Translation initiation factor IF-3; Belongs to the IF-3 family.	Metal-binding protein.	0.882
infC	rplD	Lstg_1076	Lstg_2584	Translation initiation factor IF-3; Belongs to the IF-3 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.949
infC	rplK	Lstg_1076	Lstg_2572	Translation initiation factor IF-3; Belongs to the IF-3 family.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.952
infC	rplM	Lstg_1076	Lstg_1083	Translation initiation factor IF-3; Belongs to the IF-3 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.976
infC	rplU	Lstg_1076	Lstg_2361	Translation initiation factor IF-3; Belongs to the IF-3 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.921
infC	rpmF	Lstg_1076	Lstg_1934	Translation initiation factor IF-3; Belongs to the IF-3 family.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.914
infC	rpsB	Lstg_1076	Lstg_2029	Translation initiation factor IF-3; Belongs to the IF-3 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.992
infC	rpsC	Lstg_1076	Lstg_2589	Translation initiation factor IF-3; Belongs to the IF-3 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.993
infC	rpsF	Lstg_1076	Lstg_0355	Translation initiation factor IF-3; Belongs to the IF-3 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.986
infC	rpsP	Lstg_1076	Lstg_1557	Translation initiation factor IF-3; Belongs to the IF-3 family.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.946