Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_1386 | Lstg_1863 | Lstg_1386 | Lstg_1863 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.999 |
| Lstg_1386 | gcvH | Lstg_1386 | Lstg_0828 | acyl-CoA synthetase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.647 |
| Lstg_1386 | lgrB | Lstg_1386 | Lstg_1787 | acyl-CoA synthetase. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
| Lstg_1386 | lssX | Lstg_1386 | Lstg_1993 | acyl-CoA synthetase. | Legionella secretion system protein X; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.749 |
| Lstg_1386 | pksL_1 | Lstg_1386 | Lstg_2827 | acyl-CoA synthetase. | Polyketide synthase. | 0.999 |
| Lstg_1386 | ppsE | Lstg_1386 | Lstg_3310 | acyl-CoA synthetase. | Polyketide synthase, type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
| Lstg_1863 | Lstg_1386 | Lstg_1863 | Lstg_1386 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.999 |
| Lstg_1863 | gcvH | Lstg_1863 | Lstg_0828 | acyl-CoA synthetase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.767 |
| Lstg_1863 | lgrB | Lstg_1863 | Lstg_1787 | acyl-CoA synthetase. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
| Lstg_1863 | lipA | Lstg_1863 | Lstg_0458 | acyl-CoA synthetase. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.405 |
| Lstg_1863 | lssX | Lstg_1863 | Lstg_1993 | acyl-CoA synthetase. | Legionella secretion system protein X; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.846 |
| Lstg_1863 | pksL_1 | Lstg_1863 | Lstg_2827 | acyl-CoA synthetase. | Polyketide synthase. | 0.999 |
| Lstg_1863 | ppsE | Lstg_1863 | Lstg_3310 | acyl-CoA synthetase. | Polyketide synthase, type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
| Lstg_1994 | dacA | Lstg_1994 | Lstg_1995 | Hypothetical protein; Belongs to the UPF0250 family. | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family. | 0.775 |
| Lstg_1994 | lssX | Lstg_1994 | Lstg_1993 | Hypothetical protein; Belongs to the UPF0250 family. | Legionella secretion system protein X; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.878 |
| Lstg_1994 | lssY | Lstg_1994 | Lstg_1992 | Hypothetical protein; Belongs to the UPF0250 family. | Legionella secretion system protein Y. | 0.802 |
| dacA | Lstg_1994 | Lstg_1995 | Lstg_1994 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family. | Hypothetical protein; Belongs to the UPF0250 family. | 0.775 |
| dacA | lssX | Lstg_1995 | Lstg_1993 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family. | Legionella secretion system protein X; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.758 |
| dacA | lssY | Lstg_1995 | Lstg_1992 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family. | Legionella secretion system protein Y. | 0.758 |
| gcvH | Lstg_1386 | Lstg_0828 | Lstg_1386 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | acyl-CoA synthetase. | 0.647 |
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