STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufS_2Selenocysteine lyase, PLP-dependent. (393 aa)    
Predicted Functional Partners:
nifU
NifU family FeS assembly SUF system protein.
 
 0.983
Lstg_0269
Putative iron-sulpher cluster proteins NifU.
  
 0.970
Lstg_1672
Endonuclease/exonuclease/phosphatase family protein.
    
   0.856
Lstg_2013
Endonuclease/Exonuclease/phosphatase family protein.
    
   0.856
sufC
Component of SufBCD complex, ATP-binding component of ABC superfamily.
 
 
 0.855
moeZ_3
Thiazole biosynthesis adenylyltransferase ThiF.
  
 
 0.823
sufB
Cysteine desulfurase.
 
 0.808
sufD
Component of SufBCD complex.
 
 0.801
moeZ_4
Putative molybdenum cofactor synthesis protein 3.
  
 
 0.801
sufS_1
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
  
 
0.716
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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