Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Lstg_2124Sterol desaturase-related protein. (404 aa)    
Predicted Functional Partners:
alkB2
Alkane monooxygenase.
 
 
 0.790
yjjG
Haloacid dehalogenase.
       0.702
Lstg_3341
Transmembrane protein.
 
     0.682
pilD
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
       0.616
gmr_1
Regulatory protein (GGDEF domain).
   
    0.557
sufS_2
Selenocysteine lyase, PLP-dependent.
       0.553
hmp
Oxidoreductase, FAD-binding protein.
   
 
 0.525
Lstg_2379
Cytochrome P450.
   
 0.518
lys
Saccharopine dehydrogenase.
  
     0.506
hapE
Flavin containing monooxygenase.
  
     0.469
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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