Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| algC | capD | Lstg_1190 | Lstg_0930 | Phosphomannomutase. | Polysaccharide biosynthesis protein. | 0.449 |
| algC | galU | Lstg_1190 | Lstg_0974 | Phosphomannomutase. | Glucose-1-phosphate uridylyltransferase. | 0.930 |
| algC | glmS | Lstg_1190 | Lstg_2201 | Phosphomannomutase. | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.761 |
| algC | glmU | Lstg_1190 | Lstg_2179 | Phosphomannomutase. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.758 |
| algC | msrA_1 | Lstg_1190 | Lstg_1449 | Phosphomannomutase. | Phosphoglucomutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.724 |
| algC | prs | Lstg_1190 | Lstg_1147 | Phosphomannomutase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.706 |
| algC | rmlA1 | Lstg_1190 | Lstg_2551 | Phosphomannomutase. | Nucleotidyltransferase. | 0.824 |
| algC | ugd | Lstg_1190 | Lstg_2278 | Phosphomannomutase. | UDP-glucose 6-dehydrogenase. | 0.675 |
| capD | algC | Lstg_0930 | Lstg_1190 | Polysaccharide biosynthesis protein. | Phosphomannomutase. | 0.449 |
| capD | galU | Lstg_0930 | Lstg_0974 | Polysaccharide biosynthesis protein. | Glucose-1-phosphate uridylyltransferase. | 0.686 |
| capD | glmU | Lstg_0930 | Lstg_2179 | Polysaccharide biosynthesis protein. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.738 |
| capD | mraY | Lstg_0930 | Lstg_1630 | Polysaccharide biosynthesis protein. | phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.741 |
| capD | msrA_1 | Lstg_0930 | Lstg_1449 | Polysaccharide biosynthesis protein. | Phosphoglucomutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.441 |
| capD | murA | Lstg_0930 | Lstg_0397 | Polysaccharide biosynthesis protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.703 |
| capD | rmlA1 | Lstg_0930 | Lstg_2551 | Polysaccharide biosynthesis protein. | Nucleotidyltransferase. | 0.407 |
| capD | ugd | Lstg_0930 | Lstg_2278 | Polysaccharide biosynthesis protein. | UDP-glucose 6-dehydrogenase. | 0.742 |
| galU | algC | Lstg_0974 | Lstg_1190 | Glucose-1-phosphate uridylyltransferase. | Phosphomannomutase. | 0.930 |
| galU | capD | Lstg_0974 | Lstg_0930 | Glucose-1-phosphate uridylyltransferase. | Polysaccharide biosynthesis protein. | 0.686 |
| galU | glmS | Lstg_0974 | Lstg_2201 | Glucose-1-phosphate uridylyltransferase. | Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.452 |
| galU | glmU | Lstg_0974 | Lstg_2179 | Glucose-1-phosphate uridylyltransferase. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.799 |
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