Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_0466 | Lstg_0467 | Lstg_0466 | Lstg_0467 | Mevalonate kinase. | Diphosphomevalonate decarboxylase. | 0.995 |
| Lstg_0466 | fni | Lstg_0466 | Lstg_2226 | Mevalonate kinase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.870 |
| Lstg_0466 | mvaA | Lstg_0466 | Lstg_0475 | Mevalonate kinase. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.940 |
| Lstg_0467 | Lstg_0466 | Lstg_0467 | Lstg_0466 | Diphosphomevalonate decarboxylase. | Mevalonate kinase. | 0.995 |
| Lstg_0467 | fni | Lstg_0467 | Lstg_2226 | Diphosphomevalonate decarboxylase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.914 |
| Lstg_0467 | ispA | Lstg_0467 | Lstg_3233 | Diphosphomevalonate decarboxylase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.773 |
| Lstg_0467 | ispB | Lstg_0467 | Lstg_2365 | Diphosphomevalonate decarboxylase. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.773 |
| Lstg_0467 | mvaA | Lstg_0467 | Lstg_0475 | Diphosphomevalonate decarboxylase. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.951 |
| fni | Lstg_0466 | Lstg_2226 | Lstg_0466 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Mevalonate kinase. | 0.870 |
| fni | Lstg_0467 | Lstg_2226 | Lstg_0467 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Diphosphomevalonate decarboxylase. | 0.914 |
| fni | guaA | Lstg_2226 | Lstg_0295 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.832 |
| fni | ispA | Lstg_2226 | Lstg_3233 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.764 |
| fni | ispB | Lstg_2226 | Lstg_2365 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.687 |
| fni | maeB_2 | Lstg_2226 | Lstg_2869 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | NADP-dependent malic enzyme. | 0.698 |
| fni | mvaA | Lstg_2226 | Lstg_0475 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.850 |
| fni | pta | Lstg_2226 | Lstg_0614 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Phosphate acetyl/butaryl transferase. | 0.679 |
| fni | pykA | Lstg_2226 | Lstg_2915 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Pyruvate kinase II; Belongs to the pyruvate kinase family. | 0.682 |
| fni | ribH | Lstg_2226 | Lstg_2227 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase); Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.779 |
| guaA | fni | Lstg_0295 | Lstg_2226 | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.832 |
| guaA | ispA | Lstg_0295 | Lstg_3233 | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.400 |
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