STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxNHigh affinity nickel transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. (359 aa)    
Predicted Functional Partners:
scnB
Thiocyanate hydrolase subunit beta.
 
     0.738
scnA
Thiocyanate hydrolase subunit alpha.
       0.685
scnC
Thiocyanate hydrolase subunit gamma.
 
     0.665
yaaA
Hypothetical protein; Belongs to the UPF0246 family.
 
      0.655
pcp_3
Serine protease, subtilase family.
  
     0.567
pcp_2
Serine protease, subtilase family.
  
     0.531
pcp_1
Serine protease, subtilase family.
  
     0.500
Lstg_2259
Hypothetical protein.
       0.475
clcA_1
Chloride channel protein.
  
     0.469
yveA_3
Amino acid permease.
  
     0.445
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.