Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
scnCThiocyanate hydrolase subunit gamma. (247 aa)    
Predicted Functional Partners:
scnB
Thiocyanate hydrolase subunit beta.
 
  
  0.970
scnA
Thiocyanate hydrolase subunit alpha.
 
  
  0.966
gatA
glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
 0.723
hoxN
High affinity nickel transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
     0.661
Lstg_0675
Carbon-nitrogen hydrolase.
     
 0.590
gatA_3
Amidase.
    
  0.572
nylA
Amidase; Belongs to the amidase family.
    
  0.572
gatA_1
Amidase; Belongs to the amidase family.
    
  0.572
Lstg_1951
Amidase.
     
  0.567
Lstg_2905
Hypothetical protein.
     
  0.567
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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