Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_2287Hypothetical protein. (162 aa)    
Predicted Functional Partners:
dacB_1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
 
  
  0.850
mrdA
Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
     
 0.820
Lstg_2785
Type III restriction enzyme, res subunit.
  
     0.727
iraA
Small-molecule methyltransferase IraA.
  
     0.700
Lstg_0931
LphB.
  
     0.696
Lstg_0911
Coiled-coil protein.
  
     0.679
Lstg_2810
Hypothetical protein.
  
     0.652
Lstg_1214
Hypothetical protein.
  
     0.649
Lstg_0511
Serine/threonine-protein kinase.
  
     0.647
Lstg_1402
Sphingomyelin phosphodiesterase.
  
     0.630
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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