STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DWF7-dehydrocholesterol reductase. (431 aa)    
Predicted Functional Partners:
Lstg_3415
Serine carboxypeptidase.
  
     0.743
Lstg_0870
Leucine Rich repeats (2 copies).
  
     0.716
Lstg_1529
3-oxo-5-alpha-steroid 4-dehydrogenase.
  
     0.715
Lstg_2282
Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system).
  
 
   0.661
legL1
Gala protein type 1, 3 or 4.
  
     0.657
Lstg_0805
Ras family GTPase.
  
 
  0.654
drrA_2
Multifunctional virulence effector protein DrrA.
  
 
  0.642
legL7_2
Leucine-rich repeat-containing protein.
  
 
   0.628
Lstg_0835
Ras family GTPase.
  
 
  0.626
Lstg_2033
Rho GTPase (Miro-like).
  
 
  0.626
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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