STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_2327Putative transporter. (184 aa)    
Predicted Functional Partners:
aprX
Subtilisin-like serine protease.
  
  
 0.715
Lstg_1516
Hypothetical protein.
  
    0.699
yjjG
Haloacid dehalogenase.
  
  
 0.688
pta
Phosphate acetyl/butaryl transferase.
    
  0.651
Lstg_1812
Sulfite reductase.
     
 0.636
bprV
Serine protease; Belongs to the peptidase S8 family.
  
  
 0.577
Lstg_2328
Hypothetical protein.
       0.546
hydG
Hydrogenase/sulfur reductase gamma subunit.
    
  0.501
ascD
NAD(P)H-flavin reductase.
    
  0.501
accB
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.484
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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