STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_2505TRP containing protein. (405 aa)    
Predicted Functional Partners:
ccmF
Cytochrome C-type biogenesis protein CcmF.
  
 
 0.678
Lstg_3390
Amidase.
  
     0.669
cyaB_2
Guanylate/adenylate cyclase.
 
  
  0.624
Lstg_2385
Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.618
Lstg_2056
Putative Heparan-alpha-glucosaminide N-acetyltransferase.
  
     0.565
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.482
ccmH
Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase.
  
  
 0.479
Lstg_2506
Hypothetical protein.
       0.477
Lstg_0651
ATP cone domain protein.
  
     0.402
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.