Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_1863 | bioC | Lstg_1863 | Lstg_3234 | acyl-CoA synthetase. | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.836 |
| Lstg_1863 | estB | Lstg_1863 | Lstg_2624 | acyl-CoA synthetase. | Phospholipase/carboxylesterase. | 0.464 |
| Lstg_1863 | gloB | Lstg_1863 | Lstg_0181 | acyl-CoA synthetase. | Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.848 |
| Lstg_1863 | kynB | Lstg_1863 | Lstg_2390 | acyl-CoA synthetase. | Metal-dependent hydrolase. | 0.561 |
| Lstg_1863 | pksL_1 | Lstg_1863 | Lstg_2827 | acyl-CoA synthetase. | Polyketide synthase. | 0.999 |
| Lstg_1863 | ppsE | Lstg_1863 | Lstg_3310 | acyl-CoA synthetase. | Polyketide synthase, type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
| Lstg_1863 | ratA | Lstg_1863 | Lstg_2625 | acyl-CoA synthetase. | Oligoketide cyclase/lipid transporter protein. | 0.734 |
| Lstg_1863 | sspA_1 | Lstg_1863 | Lstg_1088 | acyl-CoA synthetase. | Stringent starvation protein A. | 0.627 |
| Lstg_1863 | visC | Lstg_1863 | Lstg_0784 | acyl-CoA synthetase. | Oxidoreductase with FAD/NAD(P)-binding domain protein. | 0.862 |
| bioC | Lstg_1863 | Lstg_3234 | Lstg_1863 | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | acyl-CoA synthetase. | 0.836 |
| bioC | pksL_1 | Lstg_3234 | Lstg_2827 | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | Polyketide synthase. | 0.724 |
| bioC | ppsE | Lstg_3234 | Lstg_3310 | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | Polyketide synthase, type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.724 |
| bioC | ratA | Lstg_3234 | Lstg_2625 | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | Oligoketide cyclase/lipid transporter protein. | 0.493 |
| bioC | visC | Lstg_3234 | Lstg_0784 | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | Oxidoreductase with FAD/NAD(P)-binding domain protein. | 0.515 |
| estB | Lstg_1863 | Lstg_2624 | Lstg_1863 | Phospholipase/carboxylesterase. | acyl-CoA synthetase. | 0.464 |
| estB | pasI | Lstg_2624 | Lstg_2626 | Phospholipase/carboxylesterase. | Persistence and stress-resistance antitoxin PasI; Belongs to the UPF0125 (RnfH) family. | 0.802 |
| estB | ratA | Lstg_2624 | Lstg_2625 | Phospholipase/carboxylesterase. | Oligoketide cyclase/lipid transporter protein. | 0.802 |
| gloB | Lstg_1863 | Lstg_0181 | Lstg_1863 | Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | acyl-CoA synthetase. | 0.848 |
| gloB | pksL_1 | Lstg_0181 | Lstg_2827 | Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | Polyketide synthase. | 0.662 |
| gloB | ppsE | Lstg_0181 | Lstg_3310 | Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | Polyketide synthase, type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.662 |
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