STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_2769Transporter family transporter protein. (139 aa)    
Predicted Functional Partners:
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB.
  
     0.770
Lstg_1404
Phospholipase/lecithinase/hemolysin.
  
     0.761
fabA
3-hydroxymyristoyl-ACP dehydratase.
 
     0.729
Lstg_2843
Protein kinase domain protein.
  
     0.710
Lstg_0911
Coiled-coil protein.
  
    0.707
iraA
Small-molecule methyltransferase IraA.
 
     0.695
Lstg_2785
Type III restriction enzyme, res subunit.
  
     0.690
Lstg_2959
Putative Glutathione synthetase ATP-binding domain-like protein.
  
     0.688
Lstg_2810
Hypothetical protein.
  
     0.663
Lstg_0511
Serine/threonine-protein kinase.
  
     0.653
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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