STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lly4-hydroxyphenylpyruvate dioxygenase. (350 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
 
 0.994
Lstg_2776
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.936
Lstg_2777
Fumarylacetoacetate hydrolase.
 
  
 0.935
phhA
Phenylalanine-4-hydroxylase.
 
  
 0.920
mccA
Acyl CoA carboxylase subunit alpha.
  
 
 0.862
Lstg_0093
Acetyl/propionyl-CoA carboxylase, beta subunit.
  
 
 0.813
mdcE
Malonate decarboxylase subunit gamma.
  
 
 0.813
accD5_1
propionyl-CoA carboxylase subunit beta.
  
 
 0.813
Lstg_1863
acyl-CoA synthetase.
   
 0.806
Lstg_1855
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.776
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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