STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_2860Transmembrane protein. (299 aa)    
Predicted Functional Partners:
araC
AraC family transcriptional regulator.
       0.659
Lstg_2366
Cysteine protease.
  
     0.585
Lstg_1726
Zinc-iron permease (ZIP) family metal cation transporter.
  
   0.549
Lstg_0425
Protein-tyrosine phosphatase.
  
     0.484
Lstg_1605
Protein IcmE (DotG).
  
    0.468
Lstg_0993
PAP2 family protein.
  
   0.446
Lstg_2859
Hypothetical protein.
       0.440
Lstg_0165
Secreted protein.
  
     0.414
rtcB
Replication factor C subunit (activator I); Belongs to the RtcB family.
       0.412
dotA
Defect in organelle trafficking protein DotA.
  
     0.405
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.