STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cph2_3Regulatory protein (GGDEF and EAL domains). (548 aa)    
Predicted Functional Partners:
cph2_2
Regulatory protein (GGDEF, PAS, PAC domains).
 
 0.956
gmr_1
Regulatory protein (GGDEF domain).
 
0.927
cph2_5
Regulatory protein (GGDEF domain).
0.871
arcB_1
Sensory box histidine kinase/response regulator.
 0.868
luxQ_1
Sensory histidine-kinase / response regulator.
 
 0.854
bvgS
Sensory box histidine kinase/response regulator.
 
 0.854
pleD_1
Sensor histidine kinase.
 
0.846
letS
Legionella transmission sensor LetS.
 
 0.811
gmr_4
Diguanylate kinase.
 
 
  0.805
pleD_3
Diguanylate kinase.
  
 
  0.805
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.