STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywtG_2D-xylose proton symporter. (433 aa)    
Predicted Functional Partners:
Lstg_2884
HD domain protein.
       0.762
Lstg_2885
Phytanoyl-CoA dioxygenase (PhyH).
       0.762
Lstg_1863
acyl-CoA synthetase.
    
 0.510
proP_1
Major facilitator family transporter.
  
  
  0.501
yveA_2
Amino acid permease family protein.
  
     0.468
ydhC_2
Major facilitator superfamily (MFS) transporter.
 
     0.456
Lstg_2887
Hypothetical protein.
       0.453
tphA_1
Hypothetical protein.
  
     0.453
yveA_3
Amino acid permease.
  
     0.452
proP_2
Major facilitator family transporter.
  
     0.439
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.