STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hopD2Tyrosine phosphatase II superfamily protein. (323 aa)    
Predicted Functional Partners:
yjeA_1
Endo-1,4-beta-xylanase.
  
 0.871
yjeA_2
Endo-1,4-beta-xylanase-like protein.
   
 0.855
Lstg_3148
Double zinc ribbon.
  
 
 
 0.786
Lstg_3319
Hypothetical protein.
 
 
  0.773
Lstg_0160
Photosystem I assembly protein Ycf3.
  
  0.762
Lstg_0785
SET domain protein.
  
 
 
 0.762
Lstg_1228
Calcium-transporting ATPase.
  
 
   0.743
Lstg_1207
Protein phosphatase 2C.
  
 
   0.738
Lstg_1516
Hypothetical protein.
  
     0.728
bcp
Acetylpolyamine aminohydrolase.
  
 
 
 0.717
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.