STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_2978Putative conjugative transfer protein TraF. (260 aa)    
Predicted Functional Partners:
msrA_2
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.992
Lstg_2976
Putative conjugative transfer protein TrbC.
 
     0.953
Lstg_2977
Conjugal transfer mating pair stabilization protein TraN.
 
     0.953
Lstg_2980
Putative conjugative transfer protein TraH.
 
     0.950
Lstg_2981
Putative sex pilus assembly and mating pair protein TraG.
 
     0.950
Lstg_2974
Putative conjugative transfer protein TraW.
 
     0.949
Lstg_2979
Putative conjugative transfer protein TrbB.
 
     0.949
Lstg_2975
Putative conjugative transfer protein TraU.
 
     0.945
traC_2
Putative conjugative transfer protein TraC.
 
     0.943
Lstg_2970
Putative conjugative transfer protein TraB.
 
     0.930
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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