STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_2993Hypothetical protein. (117 aa)    
Predicted Functional Partners:
Lstg_2994
Antitoxin HipB.
 
 
 0.994
Lstg_3269
Putative DNA-binding transcriptional regulator.
  
 
 0.905
Lstg_2992
Hypothetical protein.
       0.669
Lstg_2991
Hypothetical protein.
       0.576
nreC
LuxR family transcriptional regulator.
  
     0.567
Lstg_2990
Hypothetical protein.
 
     0.563
Lstg_3164
Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.557
Lstg_2949
ATP-dependent DNA helicase.
  
     0.551
celA
Endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.547
Lstg_0496
Ankyrin repeat protein.
  
     0.543
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.