STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pinTransposase (resolvase, DNA invertase). (210 aa)    
Predicted Functional Partners:
Lstg_3005
Hypothetical protein.
 
     0.697
glk
Glucokinase; Belongs to the bacterial glucokinase family.
     
  0.689
tnsB
Transposon Tn7 transposition protein TnsB.
 
   
 0.679
czcD_2
Cation efflux system protein.
       0.539
psuK
Carbohydrate kinase, pfkB family.
     
  0.503
iolCB
IolC/IolB transferase kinase protein.
     
  0.503
traI_1
Putative conjugative transfer protein TraI.
 
   
 0.501
xerD
Tyrosine recombinase XerD.
  
  
 0.471
traD_1
Putative conjugative transfer protein TraD.
 
    0.457
insF
IS3 element protein InsF.
 
   
 0.403
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.