STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_3035Hypothetical protein. (162 aa)    
Predicted Functional Partners:
copA2
Copper efflux ATPase.
 
     0.782
atpC_2
F-type H -transporting ATPase epsilon chain.
  
     0.745
Lstg_3202
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.717
Lstg_3018
ATP synthase protein I.
  
     0.700
Lstg_3170
Putative secreted esterase.
  
  
  0.680
Lstg_2979
Putative conjugative transfer protein TrbB.
  
     0.677
traI_2
Putative conjugative transfer protein TraI.
  
     0.677
Lstg_3200
Phosphotransferase enzyme family protein.
  
     0.675
Lstg_0601
NHL repeat protein.
  
     0.666
Lstg_0900
Transmembrane protein.
  
     0.663
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.