STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copA_1Copper transporting P-type ATPase. (738 aa)    
Predicted Functional Partners:
copA_2
Copper efflux ATPase.
 
 
 0.874
ctpA_2
Cation efflux transporter.
   
  0.578
copA_2-2
Multicopper oxidase.
  
 
  0.565
cueO
Multicopper oxidase.
 
 
  0.552
copA2
Copper efflux ATPase.
  
 
  0.548
gmr_4
Diguanylate kinase.
       0.539
Lstg_3046
Hypothetical protein.
       0.520
prs_3
Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.
       0.451
pdp_2
Thymidine phosphorylase.
       0.449
Lstg_3049
Metallo-beta lactamase family transporter protein.
       0.444
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.