STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_3062Hypothetical protein. (155 aa)    
Predicted Functional Partners:
gsiD
ABC transporter permease.
  
 
 0.877
fimB
Type 1 fimbriae regulatory protein FimB.
       0.775
guaA
GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.760
hbpA
Bacterial extracellular solute-binding protein.
  
 0.679
Lstg_3375
T-complex protein 10 C-terminus.
  
 0.679
gsiA
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 
 0.636
recX-2
Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family.
       0.568
Lstg_3060
Hypothetical protein.
       0.545
artM
ABC transporter ATP-binding protein.
     
 0.523
Lstg_2930
Stigma-specific protein, Stig1.
    
  0.485
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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