Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
copA1 | copA2 | Lstg_3157 | Lstg_3034 | Copper efflux ATPase. | Copper efflux ATPase. | 0.522 |
copA1 | copA_2 | Lstg_3157 | Lstg_3139 | Copper efflux ATPase. | Copper efflux ATPase. | 0.868 |
copA1 | copA_2-2 | Lstg_3157 | Lstg_0608 | Copper efflux ATPase. | Multicopper oxidase. | 0.546 |
copA1 | csoR | Lstg_3157 | Lstg_3158 | Copper efflux ATPase. | Copper-sensing transcriptional repressor CsoR. | 0.801 |
copA1 | cueO | Lstg_3157 | Lstg_0937 | Copper efflux ATPase. | Multicopper oxidase. | 0.523 |
copA1 | pleD_3 | Lstg_3157 | Lstg_3159 | Copper efflux ATPase. | Diguanylate kinase. | 0.455 |
copA2 | copA1 | Lstg_3034 | Lstg_3157 | Copper efflux ATPase. | Copper efflux ATPase. | 0.522 |
copA2 | copA_2 | Lstg_3034 | Lstg_3139 | Copper efflux ATPase. | Copper efflux ATPase. | 0.695 |
copA_2 | copA1 | Lstg_3139 | Lstg_3157 | Copper efflux ATPase. | Copper efflux ATPase. | 0.868 |
copA_2 | copA2 | Lstg_3139 | Lstg_3034 | Copper efflux ATPase. | Copper efflux ATPase. | 0.695 |
copA_2 | copA_2-2 | Lstg_3139 | Lstg_0608 | Copper efflux ATPase. | Multicopper oxidase. | 0.694 |
copA_2 | cueO | Lstg_3139 | Lstg_0937 | Copper efflux ATPase. | Multicopper oxidase. | 0.769 |
copA_2-2 | copA1 | Lstg_0608 | Lstg_3157 | Multicopper oxidase. | Copper efflux ATPase. | 0.546 |
copA_2-2 | copA_2 | Lstg_0608 | Lstg_3139 | Multicopper oxidase. | Copper efflux ATPase. | 0.694 |
csoR | copA1 | Lstg_3158 | Lstg_3157 | Copper-sensing transcriptional repressor CsoR. | Copper efflux ATPase. | 0.801 |
csoR | pleD_3 | Lstg_3158 | Lstg_3159 | Copper-sensing transcriptional repressor CsoR. | Diguanylate kinase. | 0.455 |
cueO | copA1 | Lstg_0937 | Lstg_3157 | Multicopper oxidase. | Copper efflux ATPase. | 0.523 |
cueO | copA_2 | Lstg_0937 | Lstg_3139 | Multicopper oxidase. | Copper efflux ATPase. | 0.769 |
pleD_3 | copA1 | Lstg_3159 | Lstg_3157 | Diguanylate kinase. | Copper efflux ATPase. | 0.455 |
pleD_3 | csoR | Lstg_3159 | Lstg_3158 | Diguanylate kinase. | Copper-sensing transcriptional repressor CsoR. | 0.455 |