STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_3163Multidrug resistance ABC transporter ATP binding protein. (595 aa)    
Predicted Functional Partners:
uup_3
ABC transporter ATP-binding protein Uup.
 
 
  0.914
Lstg_1863
acyl-CoA synthetase.
  
 0.886
apxIB
Toxin secretion ABC transporter ATP-binding protein.
   
  0.841
Lstg_3166
GNAT family acetyltransferase.
 
     0.809
Lstg_3168
ATPase.
 
     0.803
Lstg_3167
Hypothetical protein.
 
     0.800
Lstg_3164
Streptomycin 3''-adenylyltransferase; Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
 
     0.789
grpB
Glutamate rich protein GrpB.
       0.764
pksL_1
Polyketide synthase.
   
 0.731
ppsE
Polyketide synthase, type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.731
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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