Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_0776 | cysK | Lstg_0776 | Lstg_3226 | Aspartate aminotransferase. | Cystathionine beta-synthase. | 0.662 |
| Lstg_0776 | pepA | Lstg_0776 | Lstg_2343 | Aspartate aminotransferase. | Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.662 |
| Lstg_0776 | pepB_1 | Lstg_0776 | Lstg_3354 | Aspartate aminotransferase. | Aminopeptidase; Belongs to the peptidase M17 family. | 0.518 |
| cysK | Lstg_0776 | Lstg_3226 | Lstg_0776 | Cystathionine beta-synthase. | Aspartate aminotransferase. | 0.662 |
| cysK | ggt | Lstg_3226 | Lstg_1150 | Cystathionine beta-synthase. | Gamma-glutamyltranspeptidase. | 0.537 |
| cysK | glyA | Lstg_3226 | Lstg_1040 | Cystathionine beta-synthase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.586 |
| cysK | iscS | Lstg_3226 | Lstg_0268 | Cystathionine beta-synthase. | Cysteine desulfurase. | 0.800 |
| cysK | pepA | Lstg_3226 | Lstg_2343 | Cystathionine beta-synthase. | Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.685 |
| cysK | pepB_1 | Lstg_3226 | Lstg_3354 | Cystathionine beta-synthase. | Aminopeptidase; Belongs to the peptidase M17 family. | 0.550 |
| cysK | pepN_1 | Lstg_3226 | Lstg_1464 | Cystathionine beta-synthase. | Aminopeptidase. | 0.677 |
| cysK | pepN_2 | Lstg_3226 | Lstg_2110 | Cystathionine beta-synthase. | Aminopeptidase. | 0.661 |
| ggt | cysK | Lstg_1150 | Lstg_3226 | Gamma-glutamyltranspeptidase. | Cystathionine beta-synthase. | 0.537 |
| ggt | gshB | Lstg_1150 | Lstg_0073 | Gamma-glutamyltranspeptidase. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.685 |
| ggt | pepA | Lstg_1150 | Lstg_2343 | Gamma-glutamyltranspeptidase. | Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.659 |
| ggt | pepB_1 | Lstg_1150 | Lstg_3354 | Gamma-glutamyltranspeptidase. | Aminopeptidase; Belongs to the peptidase M17 family. | 0.515 |
| ggt | pepN_1 | Lstg_1150 | Lstg_1464 | Gamma-glutamyltranspeptidase. | Aminopeptidase. | 0.640 |
| ggt | pepN_2 | Lstg_1150 | Lstg_2110 | Gamma-glutamyltranspeptidase. | Aminopeptidase. | 0.635 |
| glyA | cysK | Lstg_1040 | Lstg_3226 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Cystathionine beta-synthase. | 0.586 |
| glyA | pepA | Lstg_1040 | Lstg_2343 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.637 |
| glyA | pepB_1 | Lstg_1040 | Lstg_3354 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminopeptidase; Belongs to the peptidase M17 family. | 0.483 |
page 1 of 4